Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sox18P43680 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.15□□□□□ -0.14
Sox18P43680 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Sox18P43680 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox18P43680 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.14□□□□□ -0.15
Sox18P43680 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Sox18P43680 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sox18P43680 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sox18P43680 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.14□□□□□ -0.15
Sox18P43680 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sox18P43680 Gm9719-201ENSMUST00000162765 543 ntBASIC14.14□□□□□ -0.15
Sox18P43680 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.14□□□□□ -0.15
Sox18P43680 Gm42612-201ENSMUST00000197986 623 ntBASIC14.14□□□□□ -0.15
Sox18P43680 Gm43170-201ENSMUST00000199827 612 ntBASIC14.14□□□□□ -0.15
Sox18P43680 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.14□□□□□ -0.15
Sox18P43680 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox18P43680 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC14.14□□□□□ -0.15
Sox18P43680 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox18P43680 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.13□□□□□ -0.15
Sox18P43680 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox18P43680 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox18P43680 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.13□□□□□ -0.15
Sox18P43680 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Gm4875-201ENSMUST00000118257 786 ntBASIC14.13□□□□□ -0.15
Sox18P43680 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.13□□□□□ -0.15
Sox18P43680 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Gm37917-201ENSMUST00000194711 392 ntBASIC14.13□□□□□ -0.15
Sox18P43680 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Shd-206ENSMUST00000225145 998 ntBASIC14.13□□□□□ -0.15
Sox18P43680 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.13□□□□□ -0.15
Sox18P43680 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox18P43680 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Sox18P43680 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox18P43680 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Sox18P43680 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.12□□□□□ -0.15
Sox18P43680 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Sox18P43680 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sox18P43680 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox18P43680 Gm11918-201ENSMUST00000121660 179 ntBASIC14.12□□□□□ -0.15
Sox18P43680 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Sox18P43680 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms