Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Msh2P43247 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.23■□□□□ 0.03
Msh2P43247 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.22■□□□□ 0.03
Msh2P43247 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.22■□□□□ 0.03
Msh2P43247 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Msh2P43247 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.22■□□□□ 0.03
Msh2P43247 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.22■□□□□ 0.03
Msh2P43247 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 AV026068-213ENSMUST00000223675 1171 ntBASIC15.22■□□□□ 0.03
Msh2P43247 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.22■□□□□ 0.03
Msh2P43247 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.22■□□□□ 0.03
Msh2P43247 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Msh2P43247 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh2P43247 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Msh2P43247 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.21■□□□□ 0.03
Msh2P43247 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Msh2P43247 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.21■□□□□ 0.03
Msh2P43247 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Msh2P43247 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.21■□□□□ 0.03
Msh2P43247 Celf4-206ENSMUST00000224553 1729 ntBASIC15.21■□□□□ 0.03
Msh2P43247 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Msh2P43247 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Gm5682-201ENSMUST00000173402 505 ntBASIC15.21■□□□□ 0.03
Msh2P43247 Mir5126-201ENSMUST00000175513 77 ntBASIC15.21■□□□□ 0.03
Msh2P43247 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.21■□□□□ 0.03
Msh2P43247 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.21■□□□□ 0.03
Msh2P43247 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.21■□□□□ 0.03
Msh2P43247 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Msh2P43247 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Msh2P43247 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.21■□□□□ 0.03
Msh2P43247 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Msh2P43247 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh2P43247 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Msh2P43247 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh2P43247 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh2P43247 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Msh2P43247 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh2P43247 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh2P43247 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Msh2P43247 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh2P43247 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Msh2P43247 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Msh2P43247 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Msh2P43247 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Msh2P43247 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Gm12350-201ENSMUST00000121208 462 ntBASIC15.2■□□□□ 0.02
Msh2P43247 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Msh2P43247 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.2■□□□□ 0.02
Msh2P43247 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.2■□□□□ 0.02
Msh2P43247 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.2■□□□□ 0.02
Msh2P43247 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Msh2P43247 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms