Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HttP42859 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HttP42859 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.45■□□□□ 0.06
HttP42859 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
HttP42859 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.44■□□□□ 0.06
HttP42859 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HttP42859 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HttP42859 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HttP42859 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HttP42859 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HttP42859 Gm11524-201ENSMUST00000119349 807 ntBASIC15.44■□□□□ 0.06
HttP42859 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HttP42859 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.44■□□□□ 0.06
HttP42859 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.44■□□□□ 0.06
HttP42859 Gm43818-201ENSMUST00000200605 466 ntBASIC15.44■□□□□ 0.06
HttP42859 Gm43947-201ENSMUST00000203019 959 ntBASIC15.44■□□□□ 0.06
HttP42859 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HttP42859 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HttP42859 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HttP42859 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.44■□□□□ 0.06
HttP42859 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HttP42859 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HttP42859 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.44■□□□□ 0.06
HttP42859 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.44■□□□□ 0.06
HttP42859 Gm12997-201ENSMUST00000120207 640 ntBASIC15.44■□□□□ 0.06
HttP42859 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.44■□□□□ 0.06
HttP42859 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
HttP42859 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.44■□□□□ 0.06
HttP42859 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HttP42859 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
HttP42859 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HttP42859 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HttP42859 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.43■□□□□ 0.06
HttP42859 Gm29396-201ENSMUST00000185659 716 ntBASIC15.43■□□□□ 0.06
HttP42859 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.43■□□□□ 0.06
HttP42859 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.43■□□□□ 0.06
HttP42859 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.43■□□□□ 0.06
HttP42859 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.43■□□□□ 0.06
HttP42859 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
HttP42859 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HttP42859 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.43■□□□□ 0.06
HttP42859 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HttP42859 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
HttP42859 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.43■□□□□ 0.06
HttP42859 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.43■□□□□ 0.06
HttP42859 Proscos-202ENSMUST00000178990 666 ntBASIC15.43■□□□□ 0.06
HttP42859 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.43■□□□□ 0.06
HttP42859 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HttP42859 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HttP42859 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.43■□□□□ 0.06
HttP42859 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HttP42859 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HttP42859 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HttP42859 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HttP42859 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HttP42859 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.43■□□□□ 0.06
HttP42859 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.43■□□□□ 0.06
HttP42859 Gm4804-201ENSMUST00000182234 999 ntBASIC15.43■□□□□ 0.06
HttP42859 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HttP42859 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HttP42859 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC15.42■□□□□ 0.06
HttP42859 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.42■□□□□ 0.06
HttP42859 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.42■□□□□ 0.06
HttP42859 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.42■□□□□ 0.06
HttP42859 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.42■□□□□ 0.06
HttP42859 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HttP42859 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.42■□□□□ 0.06
HttP42859 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HttP42859 Gm37986-201ENSMUST00000193285 383 ntBASIC15.42■□□□□ 0.06
HttP42859 Gm38671-201ENSMUST00000200573 130 ntBASIC15.42■□□□□ 0.06
HttP42859 Olfr284-202ENSMUST00000206647 966 ntBASIC15.42■□□□□ 0.06
HttP42859 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HttP42859 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.41■□□□□ 0.06
HttP42859 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.41■□□□□ 0.06
HttP42859 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Gm43138-201ENSMUST00000199123 708 ntBASIC15.41■□□□□ 0.06
HttP42859 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms