Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Abca1P41233 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Abca1P41233 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.3□□□□□ -0.44
Abca1P41233 Gm8410-201ENSMUST00000117225 605 ntBASIC12.3□□□□□ -0.44
Abca1P41233 Gm14719-201ENSMUST00000121891 340 ntBASIC12.3□□□□□ -0.44
Abca1P41233 Gm27989-201ENSMUST00000184721 107 ntBASIC12.3□□□□□ -0.44
Abca1P41233 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.3□□□□□ -0.44
Abca1P41233 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Abca1P41233 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.3□□□□□ -0.44
Abca1P41233 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.3□□□□□ -0.44
Abca1P41233 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.3□□□□□ -0.44
Abca1P41233 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Abca1P41233 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Abca1P41233 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.3□□□□□ -0.44
Abca1P41233 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Abca1P41233 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.29□□□□□ -0.44
Abca1P41233 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Abca1P41233 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Abca1P41233 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.29□□□□□ -0.44
Abca1P41233 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Abca1P41233 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.29□□□□□ -0.44
Abca1P41233 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.29□□□□□ -0.44
Abca1P41233 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Abca1P41233 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Abca1P41233 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Abca1P41233 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Abca1P41233 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.28□□□□□ -0.44
Abca1P41233 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Abca1P41233 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Abca1P41233 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Abca1P41233 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.28□□□□□ -0.44
Abca1P41233 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.28□□□□□ -0.44
Abca1P41233 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Gm12151-201ENSMUST00000121374 290 ntBASIC12.28□□□□□ -0.44
Abca1P41233 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.28□□□□□ -0.44
Abca1P41233 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.28□□□□□ -0.44
Abca1P41233 Gm18737-201ENSMUST00000173594 937 ntBASIC12.28□□□□□ -0.44
Abca1P41233 Gm24158-201ENSMUST00000175263 71 ntBASIC12.28□□□□□ -0.44
Abca1P41233 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.28□□□□□ -0.44
Abca1P41233 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Abca1P41233 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Abca1P41233 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms