Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdh4P39038 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cdh4P39038 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.13□□□□□ -0.15
Cdh4P39038 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.13□□□□□ -0.15
Cdh4P39038 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdh4P39038 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cdh4P39038 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Cdh4P39038 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cdh4P39038 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh4P39038 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdh4P39038 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.12□□□□□ -0.15
Cdh4P39038 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Gm45612-201ENSMUST00000211320 160 ntBASIC14.12□□□□□ -0.15
Cdh4P39038 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdh4P39038 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Cdh4P39038 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdh4P39038 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdh4P39038 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdh4P39038 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdh4P39038 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh4P39038 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cdh4P39038 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.11□□□□□ -0.15
Cdh4P39038 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.11□□□□□ -0.15
Cdh4P39038 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Cdh4P39038 Gm27494-201ENSMUST00000184735 189 ntBASIC14.11□□□□□ -0.15
Cdh4P39038 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.11□□□□□ -0.15
Cdh4P39038 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.11□□□□□ -0.15
Cdh4P39038 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdh4P39038 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdh4P39038 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.1□□□□□ -0.15
Cdh4P39038 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cdh4P39038 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdh4P39038 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms