Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LdlrP35951 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LdlrP35951 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Gm8097-201ENSMUST00000117903 829 ntBASIC14.7□□□□□ -0.06
LdlrP35951 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.7□□□□□ -0.06
LdlrP35951 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
LdlrP35951 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LdlrP35951 Gm10499-201ENSMUST00000174094 934 ntBASIC14.7□□□□□ -0.06
LdlrP35951 Gm43767-201ENSMUST00000198933 381 ntBASIC14.7□□□□□ -0.06
LdlrP35951 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.7□□□□□ -0.06
LdlrP35951 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.7□□□□□ -0.06
LdlrP35951 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.7□□□□□ -0.06
LdlrP35951 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.7□□□□□ -0.06
LdlrP35951 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LdlrP35951 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.7□□□□□ -0.06
LdlrP35951 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LdlrP35951 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LdlrP35951 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.69□□□□□ -0.06
LdlrP35951 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LdlrP35951 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LdlrP35951 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.69□□□□□ -0.06
LdlrP35951 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LdlrP35951 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.69□□□□□ -0.06
LdlrP35951 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LdlrP35951 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.69□□□□□ -0.06
LdlrP35951 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LdlrP35951 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LdlrP35951 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.68□□□□□ -0.06
LdlrP35951 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.68□□□□□ -0.06
LdlrP35951 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Gm13036-201ENSMUST00000117799 748 ntBASIC14.68□□□□□ -0.06
LdlrP35951 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.68□□□□□ -0.06
LdlrP35951 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.68□□□□□ -0.06
LdlrP35951 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.68□□□□□ -0.06
LdlrP35951 Gm7063-201ENSMUST00000186840 981 ntBASIC14.68□□□□□ -0.06
LdlrP35951 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.68□□□□□ -0.06
LdlrP35951 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.68□□□□□ -0.06
LdlrP35951 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LdlrP35951 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LdlrP35951 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms