Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.65□□□□□ -0.22
Thbs1P35441 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thbs1P35441 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thbs1P35441 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Thbs1P35441 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Thbs1P35441 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Thbs1P35441 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.64□□□□□ -0.23
Thbs1P35441 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Thbs1P35441 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Thbs1P35441 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Thbs1P35441 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Thbs1P35441 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.64□□□□□ -0.23
Thbs1P35441 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Thbs1P35441 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Thbs1P35441 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Thbs1P35441 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Thbs1P35441 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Thbs1P35441 Gm13464-201ENSMUST00000119418 935 ntBASIC13.64□□□□□ -0.23
Thbs1P35441 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.64□□□□□ -0.23
Thbs1P35441 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.64□□□□□ -0.23
Thbs1P35441 Gm5364-201ENSMUST00000216789 889 ntBASIC13.64□□□□□ -0.23
Thbs1P35441 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.64□□□□□ -0.23
Thbs1P35441 Psmb5-202ENSMUST00000227257 622 ntBASIC13.64□□□□□ -0.23
Thbs1P35441 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.64□□□□□ -0.23
Thbs1P35441 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Thbs1P35441 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Thbs1P35441 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.64□□□□□ -0.23
Thbs1P35441 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Thbs1P35441 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thbs1P35441 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.63□□□□□ -0.23
Thbs1P35441 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Thbs1P35441 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Thbs1P35441 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Thbs1P35441 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.63□□□□□ -0.23
Thbs1P35441 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
Thbs1P35441 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.63□□□□□ -0.23
Thbs1P35441 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.63□□□□□ -0.23
Thbs1P35441 Gm11779-201ENSMUST00000118541 368 ntBASIC13.63□□□□□ -0.23
Thbs1P35441 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.63□□□□□ -0.23
Thbs1P35441 Gm25925-201ENSMUST00000158314 306 ntBASIC13.63□□□□□ -0.23
Thbs1P35441 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.63□□□□□ -0.23
Thbs1P35441 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.63□□□□□ -0.23
Thbs1P35441 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.63□□□□□ -0.23
Thbs1P35441 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.63□□□□□ -0.23
Thbs1P35441 Gm8000-201ENSMUST00000188378 592 ntBASIC13.63□□□□□ -0.23
Thbs1P35441 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Thbs1P35441 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Thbs1P35441 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Thbs1P35441 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thbs1P35441 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Thbs1P35441 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Thbs1P35441 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms