Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nedd8P29595 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.66□□□□□ -0.22
Nedd8P29595 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.66□□□□□ -0.22
Nedd8P29595 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.66□□□□□ -0.22
Nedd8P29595 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.66□□□□□ -0.22
Nedd8P29595 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nedd8P29595 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.66□□□□□ -0.22
Nedd8P29595 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nedd8P29595 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nedd8P29595 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.66□□□□□ -0.22
Nedd8P29595 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nedd8P29595 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nedd8P29595 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nedd8P29595 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.65□□□□□ -0.22
Nedd8P29595 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.65□□□□□ -0.22
Nedd8P29595 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.65□□□□□ -0.22
Nedd8P29595 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.65□□□□□ -0.22
Nedd8P29595 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nedd8P29595 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nedd8P29595 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.65□□□□□ -0.22
Nedd8P29595 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nedd8P29595 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.64□□□□□ -0.23
Nedd8P29595 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nedd8P29595 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.64□□□□□ -0.23
Nedd8P29595 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.64□□□□□ -0.23
Nedd8P29595 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nedd8P29595 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nedd8P29595 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.63□□□□□ -0.23
Nedd8P29595 Gm15039-201ENSMUST00000118914 875 ntBASIC13.63□□□□□ -0.23
Nedd8P29595 Gm12441-201ENSMUST00000121806 588 ntBASIC13.63□□□□□ -0.23
Nedd8P29595 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.63□□□□□ -0.23
Nedd8P29595 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.63□□□□□ -0.23
Nedd8P29595 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nedd8P29595 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms