Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Vcam1P29533 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.9■□□□□ 0.3
Vcam1P29533 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vcam1P29533 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vcam1P29533 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vcam1P29533 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Vcam1P29533 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.89■□□□□ 0.29
Vcam1P29533 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Vcam1P29533 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Gm22189-201ENSMUST00000103822 86 ntBASIC16.89■□□□□ 0.29
Vcam1P29533 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.89■□□□□ 0.29
Vcam1P29533 Gm11424-201ENSMUST00000121929 829 ntBASIC16.89■□□□□ 0.29
Vcam1P29533 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.89■□□□□ 0.29
Vcam1P29533 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vcam1P29533 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.88■□□□□ 0.29
Vcam1P29533 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Vcam1P29533 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.88■□□□□ 0.29
Vcam1P29533 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.88■□□□□ 0.29
Vcam1P29533 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 AA619741-201ENSMUST00000195095 646 ntBASIC16.88■□□□□ 0.29
Vcam1P29533 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Vcam1P29533 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.88■□□□□ 0.29
Vcam1P29533 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vcam1P29533 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vcam1P29533 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vcam1P29533 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vcam1P29533 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vcam1P29533 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.87■□□□□ 0.29
Vcam1P29533 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Vcam1P29533 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Vcam1P29533 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Vcam1P29533 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vcam1P29533 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vcam1P29533 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms