Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clk1P22518 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.78□□□□□ -0.2
Clk1P22518 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clk1P22518 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clk1P22518 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clk1P22518 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.77□□□□□ -0.21
Clk1P22518 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.77□□□□□ -0.21
Clk1P22518 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.77□□□□□ -0.21
Clk1P22518 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Mir5131-201ENSMUST00000175426 93 ntBASIC13.77□□□□□ -0.21
Clk1P22518 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.77□□□□□ -0.21
Clk1P22518 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.77□□□□□ -0.21
Clk1P22518 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.77□□□□□ -0.21
Clk1P22518 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Clk1P22518 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clk1P22518 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clk1P22518 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Clk1P22518 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.76□□□□□ -0.21
Clk1P22518 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.76□□□□□ -0.21
Clk1P22518 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Clk1P22518 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Clk1P22518 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.76□□□□□ -0.21
Clk1P22518 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Clk1P22518 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.76□□□□□ -0.21
Clk1P22518 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Clk1P22518 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.76□□□□□ -0.21
Clk1P22518 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Clk1P22518 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clk1P22518 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.76□□□□□ -0.21
Clk1P22518 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.75□□□□□ -0.21
Clk1P22518 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Clk1P22518 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clk1P22518 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms