Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.17□□□□□ -0.14
BdnfP21237 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
BdnfP21237 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.17□□□□□ -0.14
BdnfP21237 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.17□□□□□ -0.14
BdnfP21237 Gm43347-201ENSMUST00000200226 580 ntBASIC14.17□□□□□ -0.14
BdnfP21237 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.17□□□□□ -0.14
BdnfP21237 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.17□□□□□ -0.14
BdnfP21237 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.17□□□□□ -0.14
BdnfP21237 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.17□□□□□ -0.14
BdnfP21237 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BdnfP21237 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.17□□□□□ -0.14
BdnfP21237 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.16□□□□□ -0.14
BdnfP21237 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
BdnfP21237 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.16□□□□□ -0.14
BdnfP21237 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.16□□□□□ -0.14
BdnfP21237 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.16□□□□□ -0.14
BdnfP21237 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
BdnfP21237 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
BdnfP21237 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.16□□□□□ -0.14
BdnfP21237 Birc2-201ENSMUST00000054878 378 ntBASIC14.16□□□□□ -0.14
BdnfP21237 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
BdnfP21237 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
BdnfP21237 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BdnfP21237 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
BdnfP21237 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
BdnfP21237 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.15□□□□□ -0.14
BdnfP21237 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.15□□□□□ -0.14
BdnfP21237 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.15□□□□□ -0.14
BdnfP21237 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
BdnfP21237 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
BdnfP21237 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.15□□□□□ -0.14
BdnfP21237 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.14□□□□□ -0.15
BdnfP21237 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms