Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hoxb9P20615 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxb9P20615 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxb9P20615 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxb9P20615 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxb9P20615 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.14□□□□□ -0.15
Hoxb9P20615 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxb9P20615 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hoxb9P20615 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxb9P20615 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxb9P20615 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hoxb9P20615 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hoxb9P20615 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hoxb9P20615 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.13□□□□□ -0.15
Hoxb9P20615 Gm14494-201ENSMUST00000118786 435 ntBASIC14.13□□□□□ -0.15
Hoxb9P20615 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Hoxb9P20615 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Hoxb9P20615 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Hoxb9P20615 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.13□□□□□ -0.15
Hoxb9P20615 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.13□□□□□ -0.15
Hoxb9P20615 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.13□□□□□ -0.15
Hoxb9P20615 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.13□□□□□ -0.15
Hoxb9P20615 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hoxb9P20615 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.13□□□□□ -0.15
Hoxb9P20615 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.13□□□□□ -0.15
Hoxb9P20615 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.13□□□□□ -0.15
Hoxb9P20615 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxb9P20615 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.12□□□□□ -0.15
Hoxb9P20615 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.12□□□□□ -0.15
Hoxb9P20615 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.12□□□□□ -0.15
Hoxb9P20615 Gm15483-201ENSMUST00000120338 456 ntBASIC14.12□□□□□ -0.15
Hoxb9P20615 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxb9P20615 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxb9P20615 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Hoxb9P20615 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hoxb9P20615 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxb9P20615 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hoxb9P20615 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Hoxb9P20615 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.11□□□□□ -0.15
Hoxb9P20615 Gm15467-201ENSMUST00000120582 445 ntBASIC14.11□□□□□ -0.15
Hoxb9P20615 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxb9P20615 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hoxb9P20615 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.11□□□□□ -0.15
Hoxb9P20615 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms