Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cntn1P12960 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Cntn1P12960 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.16□□□□□ -0.14
Cntn1P12960 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Cntn1P12960 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cntn1P12960 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.15□□□□□ -0.14
Cntn1P12960 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cntn1P12960 Gm25948-201ENSMUST00000175334 112 ntBASIC14.15□□□□□ -0.14
Cntn1P12960 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.15□□□□□ -0.14
Cntn1P12960 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.15□□□□□ -0.14
Cntn1P12960 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.15□□□□□ -0.14
Cntn1P12960 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.15□□□□□ -0.14
Cntn1P12960 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.15□□□□□ -0.14
Cntn1P12960 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.15□□□□□ -0.14
Cntn1P12960 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cntn1P12960 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Cntn1P12960 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cntn1P12960 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn1P12960 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.15□□□□□ -0.15
Cntn1P12960 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.14□□□□□ -0.15
Cntn1P12960 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cntn1P12960 Mir449b-201ENSMUST00000104833 80 ntBASIC14.14□□□□□ -0.15
Cntn1P12960 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.14□□□□□ -0.15
Cntn1P12960 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.14□□□□□ -0.15
Cntn1P12960 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
Cntn1P12960 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Cntn1P12960 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.14□□□□□ -0.15
Cntn1P12960 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Mir6956-201ENSMUST00000183598 62 ntBASIC14.14□□□□□ -0.15
Cntn1P12960 Gm27920-201ENSMUST00000183953 96 ntBASIC14.14□□□□□ -0.15
Cntn1P12960 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.14□□□□□ -0.15
Cntn1P12960 Gm7774-201ENSMUST00000200064 533 ntBASIC14.14□□□□□ -0.15
Cntn1P12960 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.14□□□□□ -0.15
Cntn1P12960 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.14□□□□□ -0.15
Cntn1P12960 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Cntn1P12960 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Cntn1P12960 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.14□□□□□ -0.15
Cntn1P12960 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cntn1P12960 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.14□□□□□ -0.15
Cntn1P12960 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cntn1P12960 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.14□□□□□ -0.15
Cntn1P12960 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.14□□□□□ -0.15
Cntn1P12960 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cntn1P12960 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.13□□□□□ -0.15
Cntn1P12960 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cntn1P12960 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cntn1P12960 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cntn1P12960 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cntn1P12960 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cntn1P12960 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Cntn1P12960 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cntn1P12960 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms