Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Hoxc6P10629 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Hoxc6P10629 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxc6P10629 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.3■□□□□ 0.2
Hoxc6P10629 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.3■□□□□ 0.2
Hoxc6P10629 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.3■□□□□ 0.2
Hoxc6P10629 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hoxc6P10629 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hoxc6P10629 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hoxc6P10629 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc6P10629 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Hoxc6P10629 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.29■□□□□ 0.2
Hoxc6P10629 Gm10766-202ENSMUST00000194123 606 ntBASIC16.29■□□□□ 0.2
Hoxc6P10629 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.29■□□□□ 0.2
Hoxc6P10629 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Gm9797-201ENSMUST00000052902 613 ntBASIC16.29■□□□□ 0.2
Hoxc6P10629 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hoxc6P10629 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc6P10629 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hoxc6P10629 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hoxc6P10629 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.28■□□□□ 0.2
Hoxc6P10629 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.28■□□□□ 0.2
Hoxc6P10629 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hoxc6P10629 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.28■□□□□ 0.2
Hoxc6P10629 Gm28760-201ENSMUST00000185995 736 ntBASIC16.28■□□□□ 0.2
Hoxc6P10629 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.28■□□□□ 0.2
Hoxc6P10629 Gm37230-201ENSMUST00000194491 818 ntBASIC16.28■□□□□ 0.2
Hoxc6P10629 Olfr286-202ENSMUST00000205305 969 ntBASIC16.28■□□□□ 0.2
Hoxc6P10629 Gm9182-201ENSMUST00000217829 639 ntBASIC16.28■□□□□ 0.2
Hoxc6P10629 Gm18624-201ENSMUST00000220966 658 ntBASIC16.28■□□□□ 0.2
Hoxc6P10629 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hoxc6P10629 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc6P10629 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Hoxc6P10629 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms