Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NefmP08553 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.81■■□□□ 1.08
NefmP08553 AC147366.1-201ENSMUST00000227671 852 ntBASIC21.81■■□□□ 1.08
NefmP08553 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
NefmP08553 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC21.81■■□□□ 1.08
NefmP08553 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NefmP08553 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NefmP08553 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NefmP08553 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NefmP08553 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NefmP08553 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NefmP08553 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NefmP08553 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NefmP08553 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NefmP08553 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NefmP08553 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NefmP08553 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NefmP08553 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NefmP08553 AC166574.6-201ENSMUST00000227889 1806 ntBASIC21.8■■□□□ 1.08
NefmP08553 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC21.8■■□□□ 1.08
NefmP08553 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NefmP08553 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
NefmP08553 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
NefmP08553 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.79■■□□□ 1.08
NefmP08553 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
NefmP08553 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC21.79■■□□□ 1.08
NefmP08553 Gm18669-201ENSMUST00000216049 778 ntBASIC21.79■■□□□ 1.08
NefmP08553 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
NefmP08553 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NefmP08553 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.79■■□□□ 1.08
NefmP08553 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
NefmP08553 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC21.79■■□□□ 1.08
NefmP08553 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NefmP08553 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Gm25990-201ENSMUST00000102440 86 ntBASIC21.78■■□□□ 1.08
NefmP08553 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
NefmP08553 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.78■■□□□ 1.08
NefmP08553 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NefmP08553 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NefmP08553 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC21.77■■□□□ 1.08
NefmP08553 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 Gm8749-201ENSMUST00000117737 331 ntBASIC21.77■■□□□ 1.08
NefmP08553 Gm15593-201ENSMUST00000122085 1008 ntBASIC21.77■■□□□ 1.08
NefmP08553 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NefmP08553 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 Gm7787-201ENSMUST00000216858 688 ntBASIC21.77■■□□□ 1.08
NefmP08553 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
NefmP08553 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms