Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ApoeP08226 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ApoeP08226 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.97□□□□□ -0.17
ApoeP08226 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
ApoeP08226 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.97□□□□□ -0.17
ApoeP08226 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Gm8097-201ENSMUST00000117903 829 ntBASIC13.97□□□□□ -0.17
ApoeP08226 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.97□□□□□ -0.17
ApoeP08226 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ApoeP08226 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ApoeP08226 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.97□□□□□ -0.17
ApoeP08226 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
ApoeP08226 Gm10231-201ENSMUST00000181584 441 ntBASIC13.97□□□□□ -0.17
ApoeP08226 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Gm10175-202ENSMUST00000208752 441 ntBASIC13.97□□□□□ -0.17
ApoeP08226 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
ApoeP08226 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ApoeP08226 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ApoeP08226 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ApoeP08226 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.97□□□□□ -0.17
ApoeP08226 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ApoeP08226 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ApoeP08226 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
ApoeP08226 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.96□□□□□ -0.17
ApoeP08226 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ApoeP08226 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ApoeP08226 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.96□□□□□ -0.17
ApoeP08226 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
ApoeP08226 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ApoeP08226 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
ApoeP08226 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
ApoeP08226 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
ApoeP08226 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ApoeP08226 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ApoeP08226 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ApoeP08226 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ApoeP08226 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ApoeP08226 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
ApoeP08226 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.95□□□□□ -0.18
ApoeP08226 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ApoeP08226 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ApoeP08226 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms