Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04213 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04213 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.16□□□□□ -0.14
P04213 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
P04213 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.16□□□□□ -0.14
P04213 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.16□□□□□ -0.14
P04213 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04213 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04213 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04213 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.16□□□□□ -0.14
P04213 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.16□□□□□ -0.14
P04213 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04213 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
P04213 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04213 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P04213 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04213 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04213 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04213 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
P04213 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.15□□□□□ -0.14
P04213 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
P04213 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P04213 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.15□□□□□ -0.14
P04213 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Gm16198-201ENSMUST00000118766 670 ntBASIC14.15□□□□□ -0.14
P04213 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P04213 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P04213 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
P04213 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P04213 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
P04213 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
P04213 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P04213 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04213 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
P04213 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
P04213 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.14□□□□□ -0.15
P04213 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
P04213 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.14□□□□□ -0.15
P04213 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
P04213 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
P04213 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
P04213 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.14□□□□□ -0.15
P04213 Gm8749-201ENSMUST00000117737 331 ntBASIC14.14□□□□□ -0.15
P04213 Gm13464-201ENSMUST00000119418 935 ntBASIC14.14□□□□□ -0.15
P04213 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.14□□□□□ -0.15
P04213 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.14□□□□□ -0.15
P04213 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
P04213 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.14□□□□□ -0.15
P04213 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.14□□□□□ -0.15
P04213 Gm7461-201ENSMUST00000058918 827 ntBASIC14.14□□□□□ -0.15
P04213 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04213 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
P04213 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04213 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04213 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P04213 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.13□□□□□ -0.15
P04213 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04213 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04213 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04213 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04213 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04213 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.13□□□□□ -0.15
P04213 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.13□□□□□ -0.15
P04213 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms