Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CfdP03953 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CfdP03953 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CfdP03953 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CfdP03953 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CfdP03953 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CfdP03953 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CfdP03953 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CfdP03953 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CfdP03953 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CfdP03953 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.34□□□□□ -0.43
CfdP03953 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
CfdP03953 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CfdP03953 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.33□□□□□ -0.44
CfdP03953 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CfdP03953 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.33□□□□□ -0.44
CfdP03953 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.33□□□□□ -0.44
CfdP03953 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Gm4459-201ENSMUST00000118750 468 ntBASIC12.33□□□□□ -0.44
CfdP03953 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CfdP03953 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.33□□□□□ -0.44
CfdP03953 Gm25745-201ENSMUST00000174945 133 ntBASIC12.33□□□□□ -0.44
CfdP03953 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CfdP03953 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.33□□□□□ -0.44
CfdP03953 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.33□□□□□ -0.44
CfdP03953 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.33□□□□□ -0.44
CfdP03953 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
CfdP03953 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.33□□□□□ -0.44
CfdP03953 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CfdP03953 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.32□□□□□ -0.44
CfdP03953 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.32□□□□□ -0.44
CfdP03953 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CfdP03953 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.32□□□□□ -0.44
CfdP03953 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.32□□□□□ -0.44
CfdP03953 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.32□□□□□ -0.44
CfdP03953 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CfdP03953 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
CfdP03953 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CfdP03953 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CfdP03953 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
CfdP03953 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CfdP03953 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
CfdP03953 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.31□□□□□ -0.44
CfdP03953 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
CfdP03953 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.31□□□□□ -0.44
CfdP03953 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.31□□□□□ -0.44
CfdP03953 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.31□□□□□ -0.44
CfdP03953 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CfdP03953 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.31□□□□□ -0.44
CfdP03953 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.31□□□□□ -0.44
CfdP03953 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CfdP03953 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms