Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hdac3O88895 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.23□□□□□ -0.29
Hdac3O88895 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hdac3O88895 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Hdac3O88895 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.23□□□□□ -0.29
Hdac3O88895 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.23□□□□□ -0.29
Hdac3O88895 Gm13884-201ENSMUST00000118103 829 ntBASIC13.23□□□□□ -0.29
Hdac3O88895 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.23□□□□□ -0.29
Hdac3O88895 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.23□□□□□ -0.29
Hdac3O88895 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hdac3O88895 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Hdac3O88895 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hdac3O88895 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hdac3O88895 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hdac3O88895 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.22□□□□□ -0.29
Hdac3O88895 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Hdac3O88895 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.22□□□□□ -0.29
Hdac3O88895 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.22□□□□□ -0.29
Hdac3O88895 Gm7787-201ENSMUST00000216858 688 ntBASIC13.22□□□□□ -0.29
Hdac3O88895 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.22□□□□□ -0.29
Hdac3O88895 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.22□□□□□ -0.29
Hdac3O88895 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Hdac3O88895 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hdac3O88895 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Hdac3O88895 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hdac3O88895 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hdac3O88895 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Hdac3O88895 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms