Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Sh2d1aO88890 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.47□□□□□ -0.73
Sh2d1aO88890 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Gm7862-201ENSMUST00000121461 292 ntBASIC10.46□□□□□ -0.73
Sh2d1aO88890 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Gm7230-201ENSMUST00000173026 815 ntBASIC10.46□□□□□ -0.73
Sh2d1aO88890 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Gm9682-201ENSMUST00000197505 556 ntBASIC10.46□□□□□ -0.73
Sh2d1aO88890 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sh2d1aO88890 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.46□□□□□ -0.74
Sh2d1aO88890 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Sh2d1aO88890 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.45□□□□□ -0.74
Sh2d1aO88890 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Celf4-206ENSMUST00000224553 1729 ntBASIC10.45□□□□□ -0.74
Sh2d1aO88890 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC10.45□□□□□ -0.74
Sh2d1aO88890 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Gm18489-201ENSMUST00000172565 551 ntBASIC10.45□□□□□ -0.74
Sh2d1aO88890 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Gm45167-201ENSMUST00000208007 322 ntBASIC10.45□□□□□ -0.74
Sh2d1aO88890 AC161829.1-201ENSMUST00000220298 281 ntBASIC10.45□□□□□ -0.74
Sh2d1aO88890 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.45□□□□□ -0.74
Sh2d1aO88890 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sh2d1aO88890 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms