Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Best1O88870 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Best1O88870 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.15□□□□□ -0.14
Best1O88870 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Best1O88870 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Best1O88870 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Best1O88870 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.15□□□□□ -0.14
Best1O88870 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Best1O88870 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Gm14767-201ENSMUST00000121559 586 ntBASIC14.15□□□□□ -0.14
Best1O88870 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.15□□□□□ -0.14
Best1O88870 Gm20949-201ENSMUST00000206478 952 ntBASIC14.15□□□□□ -0.14
Best1O88870 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.15□□□□□ -0.14
Best1O88870 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.15□□□□□ -0.14
Best1O88870 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Best1O88870 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Best1O88870 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.14□□□□□ -0.15
Best1O88870 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.14□□□□□ -0.15
Best1O88870 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Best1O88870 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Best1O88870 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
Best1O88870 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Best1O88870 Gm24543-201ENSMUST00000103867 82 ntBASIC14.14□□□□□ -0.15
Best1O88870 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Gm6222-201ENSMUST00000120787 396 ntBASIC14.14□□□□□ -0.15
Best1O88870 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.14□□□□□ -0.15
Best1O88870 Gm10275-202ENSMUST00000168697 495 ntBASIC14.14□□□□□ -0.15
Best1O88870 Gm27680-201ENSMUST00000184192 160 ntBASIC14.14□□□□□ -0.15
Best1O88870 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.14□□□□□ -0.15
Best1O88870 Gm17837-201ENSMUST00000186435 985 ntBASIC14.14□□□□□ -0.15
Best1O88870 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Gm6888-201ENSMUST00000221983 706 ntBASIC14.14□□□□□ -0.15
Best1O88870 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Gm10275-201ENSMUST00000092620 635 ntBASIC14.14□□□□□ -0.15
Best1O88870 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Best1O88870 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Best1O88870 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Best1O88870 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Best1O88870 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Best1O88870 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Best1O88870 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Best1O88870 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.13□□□□□ -0.15
Best1O88870 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms