Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Cops3O88543 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.24□□□□□ -0.29
Cops3O88543 Gm12008-201ENSMUST00000117791 755 ntBASIC13.24□□□□□ -0.29
Cops3O88543 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.24□□□□□ -0.29
Cops3O88543 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cops3O88543 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.24□□□□□ -0.29
Cops3O88543 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.24□□□□□ -0.29
Cops3O88543 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Cops3O88543 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.24□□□□□ -0.29
Cops3O88543 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.24□□□□□ -0.29
Cops3O88543 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cops3O88543 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.24□□□□□ -0.29
Cops3O88543 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.24□□□□□ -0.29
Cops3O88543 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.24□□□□□ -0.29
Cops3O88543 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cops3O88543 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cops3O88543 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cops3O88543 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.23□□□□□ -0.29
Cops3O88543 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.23□□□□□ -0.29
Cops3O88543 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.23□□□□□ -0.29
Cops3O88543 Gm4535-201ENSMUST00000182274 558 ntBASIC13.23□□□□□ -0.29
Cops3O88543 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.23□□□□□ -0.29
Cops3O88543 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.23□□□□□ -0.29
Cops3O88543 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Gm10355-201ENSMUST00000097146 517 ntBASIC13.23□□□□□ -0.29
Cops3O88543 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cops3O88543 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cops3O88543 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.23□□□□□ -0.29
Cops3O88543 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.23□□□□□ -0.29
Cops3O88543 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.22□□□□□ -0.29
Cops3O88543 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Gm44357-201ENSMUST00000195897 142 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Gm19658-201ENSMUST00000196231 138 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Gm44367-201ENSMUST00000196836 138 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Gm44350-201ENSMUST00000197197 138 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Gm44390-201ENSMUST00000197533 144 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Gm44313-201ENSMUST00000198018 138 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Gm44486-201ENSMUST00000198508 138 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Gm44314-201ENSMUST00000199263 138 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Gm44394-201ENSMUST00000199558 138 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Gm44484-201ENSMUST00000199873 138 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Gm44466-201ENSMUST00000200264 138 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Gm44359-201ENSMUST00000200671 138 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.22□□□□□ -0.29
Cops3O88543 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cops3O88543 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms