Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.26■□□□□ 0.03
Shoc2O88520 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Shoc2O88520 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Shoc2O88520 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Shoc2O88520 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Shoc2O88520 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Shoc2O88520 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Shoc2O88520 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Shoc2O88520 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Shoc2O88520 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shoc2O88520 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.25■□□□□ 0.03
Shoc2O88520 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.25■□□□□ 0.03
Shoc2O88520 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Shoc2O88520 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.25■□□□□ 0.03
Shoc2O88520 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Shoc2O88520 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Gm11779-201ENSMUST00000118541 368 ntBASIC15.25■□□□□ 0.03
Shoc2O88520 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.25■□□□□ 0.03
Shoc2O88520 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Shoc2O88520 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.25■□□□□ 0.03
Shoc2O88520 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.25■□□□□ 0.03
Shoc2O88520 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.25■□□□□ 0.03
Shoc2O88520 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Shoc2O88520 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.25■□□□□ 0.03
Shoc2O88520 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.25■□□□□ 0.03
Shoc2O88520 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.25■□□□□ 0.03
Shoc2O88520 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.25■□□□□ 0.03
Shoc2O88520 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shoc2O88520 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Shoc2O88520 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Shoc2O88520 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Shoc2O88520 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Shoc2O88520 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Shoc2O88520 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.24■□□□□ 0.03
Shoc2O88520 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Shoc2O88520 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Shoc2O88520 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shoc2O88520 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms