Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.26□□□□□ -0.13
Dnmt3bO88509 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Dnmt3bO88509 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dnmt3bO88509 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dnmt3bO88509 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dnmt3bO88509 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dnmt3bO88509 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.26□□□□□ -0.13
Dnmt3bO88509 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Dnmt3bO88509 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dnmt3bO88509 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Dnmt3bO88509 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Dnmt3bO88509 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Dnmt3bO88509 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dnmt3bO88509 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.25□□□□□ -0.13
Dnmt3bO88509 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Mir3113-201ENSMUST00000175478 76 ntBASIC14.25□□□□□ -0.13
Dnmt3bO88509 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.25□□□□□ -0.13
Dnmt3bO88509 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.25□□□□□ -0.13
Dnmt3bO88509 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.25□□□□□ -0.13
Dnmt3bO88509 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.25□□□□□ -0.13
Dnmt3bO88509 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.24□□□□□ -0.13
Dnmt3bO88509 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.24□□□□□ -0.13
Dnmt3bO88509 Grk6-207ENSMUST00000225925 2769 ntBASIC14.24□□□□□ -0.13
Dnmt3bO88509 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.24□□□□□ -0.13
Dnmt3bO88509 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Mir8117-201ENSMUST00000184773 107 ntBASIC14.24□□□□□ -0.13
Dnmt3bO88509 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.24□□□□□ -0.13
Dnmt3bO88509 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Dnmt3bO88509 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.24□□□□□ -0.13
Dnmt3bO88509 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.24□□□□□ -0.13
Dnmt3bO88509 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3bO88509 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3bO88509 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms