Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ubr1O70481 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ubr1O70481 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ubr1O70481 Gm17795-201ENSMUST00000214505 757 ntBASIC18.86■□□□□ 0.61
Ubr1O70481 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.86■□□□□ 0.61
Ubr1O70481 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC18.86■□□□□ 0.61
Ubr1O70481 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubr1O70481 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ubr1O70481 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.86■□□□□ 0.61
Ubr1O70481 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.86■□□□□ 0.61
Ubr1O70481 Gm18027-201ENSMUST00000218947 619 ntBASIC18.86■□□□□ 0.61
Ubr1O70481 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.85■□□□□ 0.61
Ubr1O70481 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.85■□□□□ 0.61
Ubr1O70481 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ubr1O70481 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ubr1O70481 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.85■□□□□ 0.61
Ubr1O70481 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.85■□□□□ 0.61
Ubr1O70481 Gm12960-201ENSMUST00000120017 1066 ntBASIC18.85■□□□□ 0.61
Ubr1O70481 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC18.85■□□□□ 0.61
Ubr1O70481 Gm21470-201ENSMUST00000187680 696 ntBASIC18.85■□□□□ 0.61
Ubr1O70481 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ubr1O70481 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubr1O70481 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ubr1O70481 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ubr1O70481 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ubr1O70481 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubr1O70481 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.84■□□□□ 0.61
Ubr1O70481 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ubr1O70481 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.84■□□□□ 0.61
Ubr1O70481 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.84■□□□□ 0.61
Ubr1O70481 Gm6266-201ENSMUST00000203844 806 ntBASIC18.84■□□□□ 0.61
Ubr1O70481 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ubr1O70481 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubr1O70481 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Ubr1O70481 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubr1O70481 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.84■□□□□ 0.61
Ubr1O70481 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ubr1O70481 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
Ubr1O70481 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.83■□□□□ 0.61
Ubr1O70481 Gm17150-201ENSMUST00000165577 381 ntBASIC18.83■□□□□ 0.61
Ubr1O70481 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.83■□□□□ 0.61
Ubr1O70481 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.83■□□□□ 0.61
Ubr1O70481 Gm5356-201ENSMUST00000093326 615 ntBASIC18.83■□□□□ 0.61
Ubr1O70481 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ubr1O70481 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ubr1O70481 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ubr1O70481 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ubr1O70481 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubr1O70481 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubr1O70481 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ubr1O70481 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ubr1O70481 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.83■□□□□ 0.6
Ubr1O70481 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.83■□□□□ 0.6
Ubr1O70481 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubr1O70481 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubr1O70481 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubr1O70481 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.82■□□□□ 0.6
Ubr1O70481 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.82■□□□□ 0.6
Ubr1O70481 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ubr1O70481 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms