Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pknox1O70477 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pknox1O70477 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pknox1O70477 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pknox1O70477 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pknox1O70477 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pknox1O70477 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pknox1O70477 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pknox1O70477 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.69□□□□□ -0.06
Pknox1O70477 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pknox1O70477 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pknox1O70477 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pknox1O70477 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.68□□□□□ -0.06
Pknox1O70477 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pknox1O70477 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pknox1O70477 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.68□□□□□ -0.06
Pknox1O70477 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pknox1O70477 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pknox1O70477 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pknox1O70477 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pknox1O70477 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pknox1O70477 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pknox1O70477 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pknox1O70477 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.67□□□□□ -0.06
Pknox1O70477 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pknox1O70477 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Pknox1O70477 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Pknox1O70477 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pknox1O70477 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.67□□□□□ -0.06
Pknox1O70477 Gm45167-201ENSMUST00000208007 322 ntBASIC14.67□□□□□ -0.06
Pknox1O70477 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pknox1O70477 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pknox1O70477 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.67□□□□□ -0.06
Pknox1O70477 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pknox1O70477 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pknox1O70477 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pknox1O70477 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pknox1O70477 Carlr-201ENSMUST00000181515 2574 ntBASIC14.67□□□□□ -0.06
Pknox1O70477 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pknox1O70477 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pknox1O70477 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pknox1O70477 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pknox1O70477 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Pknox1O70477 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Gm12008-201ENSMUST00000117791 755 ntBASIC14.66□□□□□ -0.06
Pknox1O70477 Gm23547-201ENSMUST00000158210 271 ntBASIC14.66□□□□□ -0.06
Pknox1O70477 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.66□□□□□ -0.06
Pknox1O70477 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.66□□□□□ -0.06
Pknox1O70477 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Pknox1O70477 Gm18246-201ENSMUST00000221023 728 ntBASIC14.66□□□□□ -0.06
Pknox1O70477 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Pknox1O70477 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.66□□□□□ -0.06
Pknox1O70477 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pknox1O70477 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms