Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Itgb5O70309 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Itgb5O70309 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Gm24543-201ENSMUST00000103867 82 ntBASIC16.32■□□□□ 0.2
Itgb5O70309 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.32■□□□□ 0.2
Itgb5O70309 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.32■□□□□ 0.2
Itgb5O70309 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Itgb5O70309 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Gm27321-201ENSMUST00000185021 205 ntBASIC16.32■□□□□ 0.2
Itgb5O70309 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.32■□□□□ 0.2
Itgb5O70309 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.32■□□□□ 0.2
Itgb5O70309 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.32■□□□□ 0.2
Itgb5O70309 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.32■□□□□ 0.2
Itgb5O70309 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Itgb5O70309 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Itgb5O70309 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Itgb5O70309 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Itgb5O70309 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Itgb5O70309 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Gm9063-201ENSMUST00000223299 582 ntBASIC16.31■□□□□ 0.2
Itgb5O70309 Shd-206ENSMUST00000225145 998 ntBASIC16.31■□□□□ 0.2
Itgb5O70309 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.31■□□□□ 0.2
Itgb5O70309 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Itgb5O70309 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Itgb5O70309 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Itgb5O70309 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Gm6222-201ENSMUST00000120787 396 ntBASIC16.3■□□□□ 0.2
Itgb5O70309 Gm14767-201ENSMUST00000121559 586 ntBASIC16.3■□□□□ 0.2
Itgb5O70309 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.3■□□□□ 0.2
Itgb5O70309 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.3■□□□□ 0.2
Itgb5O70309 Gm27631-201ENSMUST00000184163 466 ntBASIC16.3■□□□□ 0.2
Itgb5O70309 Gm27680-201ENSMUST00000184192 160 ntBASIC16.3■□□□□ 0.2
Itgb5O70309 Gm7063-201ENSMUST00000186840 981 ntBASIC16.3■□□□□ 0.2
Itgb5O70309 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.3■□□□□ 0.2
Itgb5O70309 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.3■□□□□ 0.2
Itgb5O70309 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.3■□□□□ 0.2
Itgb5O70309 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.3■□□□□ 0.2
Itgb5O70309 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Itgb5O70309 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Itgb5O70309 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Itgb5O70309 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Itgb5O70309 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Itgb5O70309 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Itgb5O70309 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms