Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.46□□□□□ -0.41
Cxcl13O55038 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.46□□□□□ -0.41
Cxcl13O55038 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.46□□□□□ -0.41
Cxcl13O55038 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cxcl13O55038 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cxcl13O55038 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.46□□□□□ -0.41
Cxcl13O55038 Gm9726-201ENSMUST00000180321 678 ntBASIC12.46□□□□□ -0.41
Cxcl13O55038 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cxcl13O55038 Gm9182-201ENSMUST00000217829 639 ntBASIC12.46□□□□□ -0.41
Cxcl13O55038 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.46□□□□□ -0.41
Cxcl13O55038 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cxcl13O55038 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.46□□□□□ -0.41
Cxcl13O55038 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cxcl13O55038 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Cxcl13O55038 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Cxcl13O55038 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Cxcl13O55038 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Cxcl13O55038 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cxcl13O55038 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcl13O55038 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.45□□□□□ -0.42
Cxcl13O55038 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Cxcl13O55038 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl13O55038 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl13O55038 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl13O55038 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.44□□□□□ -0.42
Cxcl13O55038 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.44□□□□□ -0.42
Cxcl13O55038 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cxcl13O55038 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl13O55038 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl13O55038 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl13O55038 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.44□□□□□ -0.42
Cxcl13O55038 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl13O55038 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl13O55038 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcl13O55038 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms