Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cacna1bO55017 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Cacna1bO55017 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cacna1bO55017 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cacna1bO55017 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cacna1bO55017 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.21□□□□□ -0.14
Cacna1bO55017 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cacna1bO55017 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cacna1bO55017 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.2□□□□□ -0.14
Cacna1bO55017 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cacna1bO55017 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cacna1bO55017 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.2□□□□□ -0.14
Cacna1bO55017 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cacna1bO55017 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1bO55017 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.19□□□□□ -0.14
Cacna1bO55017 Gm9522-201ENSMUST00000182394 926 ntBASIC14.19□□□□□ -0.14
Cacna1bO55017 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cacna1bO55017 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.19□□□□□ -0.14
Cacna1bO55017 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.19□□□□□ -0.14
Cacna1bO55017 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.19□□□□□ -0.14
Cacna1bO55017 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cacna1bO55017 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.19□□□□□ -0.14
Cacna1bO55017 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Gm9002-201ENSMUST00000178437 499 ntBASIC14.19□□□□□ -0.14
Cacna1bO55017 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.19□□□□□ -0.14
Cacna1bO55017 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cacna1bO55017 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cacna1bO55017 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1bO55017 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.18□□□□□ -0.14
Cacna1bO55017 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Cacna1bO55017 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Cacna1bO55017 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacna1bO55017 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Gm5035-201ENSMUST00000215581 927 ntBASIC14.18□□□□□ -0.14
Cacna1bO55017 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.18□□□□□ -0.14
Cacna1bO55017 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacna1bO55017 Gm9229-201ENSMUST00000222777 126 ntBASIC14.18□□□□□ -0.14
Cacna1bO55017 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.18□□□□□ -0.14
Cacna1bO55017 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.18□□□□□ -0.14
Cacna1bO55017 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.18□□□□□ -0.14
Cacna1bO55017 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms