Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccr6O54689 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccr6O54689 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccr6O54689 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccr6O54689 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccr6O54689 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccr6O54689 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccr6O54689 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccr6O54689 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccr6O54689 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccr6O54689 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccr6O54689 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccr6O54689 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccr6O54689 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccr6O54689 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.37□□□□□ -0.43
Ccr6O54689 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccr6O54689 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ccr6O54689 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.37□□□□□ -0.43
Ccr6O54689 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.37□□□□□ -0.43
Ccr6O54689 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ccr6O54689 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccr6O54689 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.37□□□□□ -0.43
Ccr6O54689 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.37□□□□□ -0.43
Ccr6O54689 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccr6O54689 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Ccr6O54689 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Ccr6O54689 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccr6O54689 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccr6O54689 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccr6O54689 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.36□□□□□ -0.43
Ccr6O54689 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccr6O54689 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Ccr6O54689 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccr6O54689 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Ccr6O54689 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccr6O54689 Gm15358-201ENSMUST00000119249 520 ntBASIC12.36□□□□□ -0.43
Ccr6O54689 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccr6O54689 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccr6O54689 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.36□□□□□ -0.43
Ccr6O54689 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccr6O54689 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccr6O54689 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccr6O54689 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Ccr6O54689 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccr6O54689 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms