Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clk4O35493 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Clk4O35493 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.21□□□□□ -0.13
Clk4O35493 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Clk4O35493 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.21□□□□□ -0.13
Clk4O35493 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.21□□□□□ -0.13
Clk4O35493 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.21□□□□□ -0.13
Clk4O35493 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.21□□□□□ -0.13
Clk4O35493 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk4O35493 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Clk4O35493 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clk4O35493 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clk4O35493 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clk4O35493 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clk4O35493 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.2□□□□□ -0.14
Clk4O35493 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.2□□□□□ -0.14
Clk4O35493 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Clk4O35493 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Clk4O35493 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Gm12260-201ENSMUST00000122447 411 ntBASIC14.2□□□□□ -0.14
Clk4O35493 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Clk4O35493 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk4O35493 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.2□□□□□ -0.14
Clk4O35493 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.19□□□□□ -0.14
Clk4O35493 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Celf4-206ENSMUST00000224553 1729 ntBASIC14.19□□□□□ -0.14
Clk4O35493 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clk4O35493 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.19□□□□□ -0.14
Clk4O35493 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Gm5264-201ENSMUST00000190584 848 ntBASIC14.19□□□□□ -0.14
Clk4O35493 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.19□□□□□ -0.14
Clk4O35493 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clk4O35493 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.19□□□□□ -0.14
Clk4O35493 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clk4O35493 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk4O35493 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Clk4O35493 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clk4O35493 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clk4O35493 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms