Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.88□□□□□ -0.19
Cx3cl1O35188 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.87□□□□□ -0.19
Cx3cl1O35188 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.87□□□□□ -0.19
Cx3cl1O35188 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Gm24513-201ENSMUST00000174964 138 ntBASIC13.87□□□□□ -0.19
Cx3cl1O35188 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Gm27397-201ENSMUST00000184997 107 ntBASIC13.87□□□□□ -0.19
Cx3cl1O35188 Gm2756-201ENSMUST00000195851 400 ntBASIC13.87□□□□□ -0.19
Cx3cl1O35188 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.87□□□□□ -0.19
Cx3cl1O35188 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.87□□□□□ -0.19
Cx3cl1O35188 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cx3cl1O35188 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Gm16026-204ENSMUST00000162652 683 ntBASIC13.86□□□□□ -0.19
Cx3cl1O35188 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Cx3cl1O35188 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cx3cl1O35188 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.85□□□□□ -0.19
Cx3cl1O35188 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Rpph1-201ENSMUST00000175096 319 ntBASIC13.85□□□□□ -0.19
Cx3cl1O35188 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.85□□□□□ -0.19
Cx3cl1O35188 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms