Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.19■□□□□ 0.02
Trove2O08848 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Trove2O08848 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.19■□□□□ 0.02
Trove2O08848 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.19■□□□□ 0.02
Trove2O08848 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trove2O08848 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.19■□□□□ 0.02
Trove2O08848 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
Trove2O08848 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.18■□□□□ 0.02
Trove2O08848 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.18■□□□□ 0.02
Trove2O08848 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.18■□□□□ 0.02
Trove2O08848 Gm12644-201ENSMUST00000119935 606 ntBASIC15.18■□□□□ 0.02
Trove2O08848 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.18■□□□□ 0.02
Trove2O08848 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.18■□□□□ 0.02
Trove2O08848 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trove2O08848 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trove2O08848 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trove2O08848 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trove2O08848 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trove2O08848 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Trove2O08848 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.17■□□□□ 0.02
Trove2O08848 Gm4459-201ENSMUST00000118750 468 ntBASIC15.17■□□□□ 0.02
Trove2O08848 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.17■□□□□ 0.02
Trove2O08848 Gm7506-201ENSMUST00000207758 815 ntBASIC15.17■□□□□ 0.02
Trove2O08848 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.17■□□□□ 0.02
Trove2O08848 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.17■□□□□ 0.02
Trove2O08848 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Trove2O08848 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trove2O08848 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.16■□□□□ 0.02
Trove2O08848 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.16■□□□□ 0.02
Trove2O08848 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.16■□□□□ 0.02
Trove2O08848 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Trove2O08848 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.16■□□□□ 0.02
Trove2O08848 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.16■□□□□ 0.02
Trove2O08848 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trove2O08848 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trove2O08848 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trove2O08848 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trove2O08848 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms