Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Polr2jO08740 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.17□□□□□ -0.14
Polr2jO08740 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.17□□□□□ -0.14
Polr2jO08740 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.17□□□□□ -0.14
Polr2jO08740 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.17□□□□□ -0.14
Polr2jO08740 Gm9682-201ENSMUST00000197505 556 ntBASIC14.17□□□□□ -0.14
Polr2jO08740 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Polr2jO08740 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.17□□□□□ -0.14
Polr2jO08740 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.17□□□□□ -0.14
Polr2jO08740 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Polr2jO08740 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Polr2jO08740 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Polr2jO08740 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.16□□□□□ -0.14
Polr2jO08740 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Polr2jO08740 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Polr2jO08740 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.16□□□□□ -0.14
Polr2jO08740 Gm13418-201ENSMUST00000119097 944 ntBASIC14.16□□□□□ -0.14
Polr2jO08740 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.16□□□□□ -0.14
Polr2jO08740 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.16□□□□□ -0.14
Polr2jO08740 Gm37153-201ENSMUST00000193637 231 ntBASIC14.16□□□□□ -0.14
Polr2jO08740 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.16□□□□□ -0.14
Polr2jO08740 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Polr2jO08740 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Polr2jO08740 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Polr2jO08740 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Polr2jO08740 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.15□□□□□ -0.14
Polr2jO08740 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Polr2jO08740 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Polr2jO08740 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Polr2jO08740 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Polr2jO08740 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Polr2jO08740 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.15□□□□□ -0.14
Polr2jO08740 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Polr2jO08740 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.15□□□□□ -0.14
Polr2jO08740 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Polr2jO08740 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2jO08740 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms