Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Gm5364-201ENSMUST00000216789 889 ntBASIC13.09□□□□□ -0.31
Raet1aO08602 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.09□□□□□ -0.31
Raet1aO08602 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Raet1aO08602 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1aO08602 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Raet1aO08602 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Raet1aO08602 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Raet1aO08602 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Raet1aO08602 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Raet1aO08602 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Raet1aO08602 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.08□□□□□ -0.32
Raet1aO08602 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.08□□□□□ -0.32
Raet1aO08602 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.08□□□□□ -0.32
Raet1aO08602 Gm16198-201ENSMUST00000118766 670 ntBASIC13.08□□□□□ -0.32
Raet1aO08602 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.08□□□□□ -0.32
Raet1aO08602 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.08□□□□□ -0.32
Raet1aO08602 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Raet1aO08602 Gm5177-201ENSMUST00000183092 997 ntBASIC13.08□□□□□ -0.32
Raet1aO08602 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Raet1aO08602 Thap2-203ENSMUST00000218989 527 ntBASIC13.08□□□□□ -0.32
Raet1aO08602 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.08□□□□□ -0.32
Raet1aO08602 Gm10154-201ENSMUST00000084445 354 ntBASIC13.08□□□□□ -0.32
Raet1aO08602 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Raet1aO08602 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.08□□□□□ -0.32
Raet1aO08602 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Raet1aO08602 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Raet1aO08602 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.07□□□□□ -0.32
Raet1aO08602 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Raet1aO08602 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Raet1aO08602 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Raet1aO08602 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.07□□□□□ -0.32
Raet1aO08602 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.07□□□□□ -0.32
Raet1aO08602 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.07□□□□□ -0.32
Raet1aO08602 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.07□□□□□ -0.32
Raet1aO08602 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.07□□□□□ -0.32
Raet1aO08602 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.07□□□□□ -0.32
Raet1aO08602 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Raet1aO08602 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Raet1aO08602 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.07□□□□□ -0.32
Raet1aO08602 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Raet1aO08602 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Raet1aO08602 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Raet1aO08602 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Raet1aO08602 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Raet1aO08602 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Raet1aO08602 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Raet1aO08602 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms