Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Gm7461-201ENSMUST00000058918 827 ntBASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 AV026068-213ENSMUST00000223675 1171 ntBASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh9F8VPK8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Mir5131-201ENSMUST00000175426 93 ntBASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Mzt1-203ENSMUST00000227948 952 ntBASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdh9F8VPK8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms