Protein–RNA interactions for Protein: F6RGI3

Gm340, Predicted gene 340, mousemouse

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm340F6RGI3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm340F6RGI3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Gm13597-201ENSMUST00000121239 375 ntBASIC14.33□□□□□ -0.12
Gm340F6RGI3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.33□□□□□ -0.12
Gm340F6RGI3 AW822252-206ENSMUST00000208904 237 ntBASIC14.33□□□□□ -0.12
Gm340F6RGI3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.33□□□□□ -0.12
Gm340F6RGI3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gm340F6RGI3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm340F6RGI3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Gm5364-201ENSMUST00000216789 889 ntBASIC14.32□□□□□ -0.12
Gm340F6RGI3 Psmb5-202ENSMUST00000227257 622 ntBASIC14.32□□□□□ -0.12
Gm340F6RGI3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.32□□□□□ -0.12
Gm340F6RGI3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.32□□□□□ -0.12
Gm340F6RGI3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm340F6RGI3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.31□□□□□ -0.12
Gm340F6RGI3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.31□□□□□ -0.12
Gm340F6RGI3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.31□□□□□ -0.12
Gm340F6RGI3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.31□□□□□ -0.12
Gm340F6RGI3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.31□□□□□ -0.12
Gm340F6RGI3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gm340F6RGI3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms