Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm1E9Q9Q2 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.29■□□□□ 0.2
R3hdm1E9Q9Q2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm1E9Q9Q2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm1E9Q9Q2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm1E9Q9Q2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.29■□□□□ 0.2
R3hdm1E9Q9Q2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
R3hdm1E9Q9Q2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm1E9Q9Q2 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.29■□□□□ 0.2
R3hdm1E9Q9Q2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
R3hdm1E9Q9Q2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm1E9Q9Q2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Gm14767-201ENSMUST00000121559 586 ntBASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Gm29541-201ENSMUST00000191351 678 ntBASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
R3hdm1E9Q9Q2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm1E9Q9Q2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm1E9Q9Q2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm1E9Q9Q2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm1E9Q9Q2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm1E9Q9Q2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm1E9Q9Q2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm1E9Q9Q2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
R3hdm1E9Q9Q2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm1E9Q9Q2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm1E9Q9Q2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
R3hdm1E9Q9Q2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Gm28630-201ENSMUST00000187806 498 ntBASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
R3hdm1E9Q9Q2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms