Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Efs-202ENSMUST00000227037 2540 ntBASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Gm17271-201ENSMUST00000165535 355 ntBASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pnldc1B2RXZ1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Gm12008-201ENSMUST00000117791 755 ntBASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Chchd1-203ENSMUST00000224633 557 ntBASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pnldc1B2RXZ1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms