Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm22323-201ENSMUST00000103832 109 ntBASIC11.03□□□□□ -0.64
Col6a5A6H584 Gm8805-201ENSMUST00000117848 313 ntBASIC11.03□□□□□ -0.64
Col6a5A6H584 Gm11793-201ENSMUST00000120433 981 ntBASIC11.03□□□□□ -0.64
Col6a5A6H584 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col6a5A6H584 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.03□□□□□ -0.64
Col6a5A6H584 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Col6a5A6H584 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.03□□□□□ -0.64
Col6a5A6H584 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.03□□□□□ -0.64
Col6a5A6H584 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Col6a5A6H584 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a5A6H584 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a5A6H584 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a5A6H584 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Col6a5A6H584 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Col6a5A6H584 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a5A6H584 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a5A6H584 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.02□□□□□ -0.65
Col6a5A6H584 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Proscos-202ENSMUST00000178990 666 ntBASIC11.02□□□□□ -0.65
Col6a5A6H584 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Col6a5A6H584 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Col6a5A6H584 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col6a5A6H584 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.02□□□□□ -0.65
Col6a5A6H584 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Col6a5A6H584 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.02□□□□□ -0.65
Col6a5A6H584 Gm15429-201ENSMUST00000151268 798 ntBASIC11.02□□□□□ -0.65
Col6a5A6H584 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.02□□□□□ -0.65
Col6a5A6H584 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col6a5A6H584 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a5A6H584 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col6a5A6H584 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.01□□□□□ -0.65
Col6a5A6H584 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Col6a5A6H584 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.01□□□□□ -0.65
Col6a5A6H584 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Gm19309-201ENSMUST00000218295 205 ntBASIC11.01□□□□□ -0.65
Col6a5A6H584 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Snora73a-201ENSMUST00000082453 205 ntBASIC11.01□□□□□ -0.65
Col6a5A6H584 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.01□□□□□ -0.65
Col6a5A6H584 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.01□□□□□ -0.65
Col6a5A6H584 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.01□□□□□ -0.65
Col6a5A6H584 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Col6a5A6H584 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Col6a5A6H584 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Mir6979-201ENSMUST00000183927 56 ntBASIC11.01□□□□□ -0.65
Col6a5A6H584 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.01□□□□□ -0.65
Col6a5A6H584 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Mir433-201ENSMUST00000093564 124 ntBASIC11.01□□□□□ -0.65
Col6a5A6H584 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col6a5A6H584 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.01□□□□□ -0.65
Col6a5A6H584 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Col6a5A6H584 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col6a5A6H584 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a5A6H584 Gm7292-201ENSMUST00000194706 2527 ntBASIC11□□□□□ -0.65
Col6a5A6H584 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC11□□□□□ -0.65
Col6a5A6H584 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Col6a5A6H584 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Prob1-201ENSMUST00000097619 3021 ntBASIC11□□□□□ -0.65
Col6a5A6H584 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms