Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Chd6A3KFM7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Gm29396-201ENSMUST00000185659 716 ntBASIC11.85□□□□□ -0.51
Chd6A3KFM7 Gm3508-201ENSMUST00000186012 792 ntBASIC11.85□□□□□ -0.51
Chd6A3KFM7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Mir125a-201ENSMUST00000083545 68 ntBASIC11.85□□□□□ -0.51
Chd6A3KFM7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd6A3KFM7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.84□□□□□ -0.51
Chd6A3KFM7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chd6A3KFM7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.84□□□□□ -0.51
Chd6A3KFM7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Gm12585-201ENSMUST00000117307 290 ntBASIC11.84□□□□□ -0.51
Chd6A3KFM7 Gm13297-201ENSMUST00000120205 934 ntBASIC11.84□□□□□ -0.51
Chd6A3KFM7 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.84□□□□□ -0.51
Chd6A3KFM7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.84□□□□□ -0.51
Chd6A3KFM7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd6A3KFM7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.51
Chd6A3KFM7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chd6A3KFM7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chd6A3KFM7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm10156-201ENSMUST00000122364 462 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Olfr284-202ENSMUST00000206647 966 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm8227-201ENSMUST00000223306 571 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm16177-201ENSMUST00000120728 718 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm1335-201ENSMUST00000121653 386 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm12208-201ENSMUST00000122004 163 ntBASIC11.83□□□□□ -0.52
Chd6A3KFM7 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms