Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Gm23218-201ENSMUST00000158124 276 ntBASIC7.63□□□□□ -1.19
Ubr4A2AN08 Gm4804-201ENSMUST00000182234 999 ntBASIC7.63□□□□□ -1.19
Ubr4A2AN08 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Gm12715-201ENSMUST00000121430 1128 ntBASIC7.63□□□□□ -1.19
Ubr4A2AN08 Gm5637-201ENSMUST00000153890 1119 ntBASIC7.63□□□□□ -1.19
Ubr4A2AN08 Gm25261-201ENSMUST00000157416 134 ntBASIC7.63□□□□□ -1.19
Ubr4A2AN08 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Gm4271-201ENSMUST00000174444 973 ntBASIC7.63□□□□□ -1.19
Ubr4A2AN08 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm9431-201ENSMUST00000119765 1051 ntBASIC7.62□□□□□ -1.19
Ubr4A2AN08 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm7904-201ENSMUST00000217049 465 ntBASIC7.62□□□□□ -1.19
Ubr4A2AN08 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm38037-201ENSMUST00000192600 1624 ntBASIC7.62□□□□□ -1.19
Ubr4A2AN08 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC7.62□□□□□ -1.19
Ubr4A2AN08 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm37905-201ENSMUST00000195310 341 ntBASIC7.62□□□□□ -1.19
Ubr4A2AN08 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm7551-201ENSMUST00000089593 1074 ntBASIC7.62□□□□□ -1.19
Ubr4A2AN08 Ankra2-208ENSMUST00000226100 1476 ntBASIC7.62□□□□□ -1.19
Ubr4A2AN08 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 AC126799.1-201ENSMUST00000221976 246 ntBASIC7.62□□□□□ -1.19
Ubr4A2AN08 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC7.62□□□□□ -1.19
Ubr4A2AN08 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms