Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccdc112A0AUP1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Gm15173-201ENSMUST00000122049 433 ntBASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc112A0AUP1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Gm4899-201ENSMUST00000178708 719 ntBASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc112A0AUP1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Gm24589-201ENSMUST00000116692 94 ntBASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Gm7862-201ENSMUST00000121461 292 ntBASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms