Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lnp1A0A1B0GSK3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lnp1A0A1B0GSK3 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lnp1A0A1B0GSK3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lnp1A0A1B0GSK3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm17968-201ENSMUST00000194902 784 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms