Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm11779-201ENSMUST00000118541 368 ntBASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Thap2-203ENSMUST00000218989 527 ntBASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-5A0A0G2JFX6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7-5A0A0G2JFX6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm27525-201ENSMUST00000184465 107 ntBASIC11.61□□□□□ -0.55
Trav7-5A0A0G2JFX6 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms