Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv4-54A0A0G2JES9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Mir3113-201ENSMUST00000175478 76 ntBASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm5177-201ENSMUST00000183092 997 ntBASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Mir8117-201ENSMUST00000184773 107 ntBASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm5264-201ENSMUST00000190584 848 ntBASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm43767-201ENSMUST00000198933 381 ntBASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Thap2-203ENSMUST00000218989 527 ntBASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv4-54A0A0G2JES9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm14494-201ENSMUST00000118786 435 ntBASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igkv4-54A0A0G2JES9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Igkv4-54A0A0G2JES9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Igkv4-54A0A0G2JES9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Igkv4-54A0A0G2JES9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Igkv4-54A0A0G2JES9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Igkv4-54A0A0G2JES9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Igkv4-54A0A0G2JES9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Igkv4-54A0A0G2JES9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms