Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trbv3A0A0A6YYE2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm22697-201ENSMUST00000175194 63 ntBASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Grk6-207ENSMUST00000225925 2769 ntBASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.36□□□□□ -0.59
Trbv3A0A0A6YYE2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm15358-201ENSMUST00000119249 520 ntBASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms