Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9d-1A0A075B699 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9d-1A0A075B699 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9d-1A0A075B699 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9d-1A0A075B699 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9d-1A0A075B699 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9d-1A0A075B699 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Gm25990-201ENSMUST00000102440 86 ntBASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Gm5682-201ENSMUST00000173402 505 ntBASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Gm34391-201ENSMUST00000203706 907 ntBASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav9d-1A0A075B699 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Gm37153-201ENSMUST00000193637 231 ntBASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Gm9682-201ENSMUST00000197505 556 ntBASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Gm43767-201ENSMUST00000198933 381 ntBASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-1A0A075B699 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trav9d-1A0A075B699 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.59
Trav9d-1A0A075B699 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9d-1A0A075B699 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.4□□□□□ -0.59
Trav9d-1A0A075B699 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9d-1A0A075B699 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav9d-1A0A075B699 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9d-1A0A075B699 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9d-1A0A075B699 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9d-1A0A075B699 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9d-1A0A075B699 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9d-1A0A075B699 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav9d-1A0A075B699 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms