Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.43□□□□□ -0.58
Trav16A0A075B653 Gm8344-201ENSMUST00000119813 856 ntBASIC11.43□□□□□ -0.58
Trav16A0A075B653 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Celf4-206ENSMUST00000224553 1729 ntBASIC11.43□□□□□ -0.58
Trav16A0A075B653 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16A0A075B653 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.42□□□□□ -0.58
Trav16A0A075B653 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav16A0A075B653 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Rprl3-201ENSMUST00000157400 290 ntBASIC11.42□□□□□ -0.58
Trav16A0A075B653 Gm23547-201ENSMUST00000158210 271 ntBASIC11.42□□□□□ -0.58
Trav16A0A075B653 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.42□□□□□ -0.58
Trav16A0A075B653 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.42□□□□□ -0.58
Trav16A0A075B653 Gm5587-201ENSMUST00000206270 674 ntBASIC11.42□□□□□ -0.58
Trav16A0A075B653 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav16A0A075B653 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.42□□□□□ -0.58
Trav16A0A075B653 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Grk6-207ENSMUST00000225925 2769 ntBASIC11.42□□□□□ -0.58
Trav16A0A075B653 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.42□□□□□ -0.58
Trav16A0A075B653 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16A0A075B653 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms