Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Gm13474-201ENSMUST00000122466 815 ntBASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Gm10653-202ENSMUST00000139570 835 ntBASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Gm23547-201ENSMUST00000158210 271 ntBASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav8-1A0A075B641 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms